BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F06SP1|AL425733
(774 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig835 1526 0.0
>3x_Contig835
Length = 2829
Score = 1526 bits (768), Expect = 0.0
Identities = 771/774 (99%)
Strand = Plus / Plus
Query: 1 aagaaacagacgaacaagtatgaggatgcaatgacaccgttagcagcggaagtgttttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 aagaaacagacgaacaagtatgaggatgcaatgacaccgttagcagcggaagtgttttca 1237
Query: 61 cttggaatttgaatagtaacagtatcatcaccgttgacaccgcctggggctggaacggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 cttggaatttgaatagtaacagtatcatcaccgttgacaccgcctggggctggaacggag 1297
Query: 121 taagtagccaagataccagcgacagagaacaaccaagtgaacatgaagataccaccaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 taagtagccaagataccagcgacagagaacaaccaagtgaacatgaagataccaccaatg 1357
Query: 181 atcaacacaggtcttctaccaaatttatcaatcaagaacaatgctgggatagtcataaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 atcaacacaggtcttctaccaaatttatcaatcaagaacaatgctgggatagtcataaca 1417
Query: 241 acatttagcacatattgaatggacgaggcaaccaagttagtgttaccagtgtaaccagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1418 acatttagcacatattgaatggacgaggcaaccaagttagtgttaccagtgtaaccagcc 1477
Query: 301 atgttgaaaatgtagacaatgtagtacatcataacattcataccacatagttgttgccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1478 atgttgaaaatgtagacaatgtagtacatcataacattcataccacatagttgttgccac 1537
Query: 361 atttgagcagaaacaccaacgattgtttttggtaaagtcttctttctgaataaatctttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1538 atttgagcagaaacaccaacgattgtttttggtaaagtcttctttctgaataaatctttg 1597
Query: 421 taaccgaagttcttggcagcagaatcgatgatgacttgttccttaatttcttccaattgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1598 taaccgaagttcttggcagcagaatcgatgatgacttgttccttaatttcttccaattgg 1657
Query: 481 aaacgaacttgttcgttgtkaacgtcaccgttagcaacgatgttagcaacgatgagagaa 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1658 aaacgaacttgttcgttgttaacgtcaccgttagcaacgatgttagcaacgatgagagaa 1717
Query: 541 gtttcttcccaacgatcatggttagccaaccaacgtggggattccgggataaagaataca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1718 gtttcttcccaacgatcatggttagccaaccaacgtggggattccgggataaagaataca 1777
Query: 601 ccgaccattaagatcaaacctggaaccatttgcaacccccaagtgattctaaaggcagca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1778 ccgaccattaagatcaaacctggaaccatttgcaacccccaagtgattctaaaggcagca 1837
Query: 661 gcgccatcaatgaagtkacaaccgtwaccgatgtagaataggaccatgataccaacggta 720
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1838 gcgccatcaatgaagtgacaaccgtaaccgatgtagaataggaccatgataccaacggta 1897
Query: 721 acagagaattggaaaagaccagaaatggtacctctaatctttggtggggagatt 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1898 acagagaattggaaaagaccagaaatggtacctctaatctttggtggggagatt 1951
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5843
Number of Sequences: 1807
Number of extensions: 5843
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 774
length of database: 10,358,551
effective HSP length: 16
effective length of query: 758
effective length of database: 10,329,639
effective search space: 7829866362
effective search space used: 7829866362
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)